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Jordan Lab Docs

Cohort used for the study

Jordan Lab Docs

Ancestry Inference Guide
Ancestry Inference Guide
- Workspace Setup
- Installations for Ancestry Inference
- Tidying the Data
  Tidying the Data
  - Quality Control
  - Data Harmonization
- Principal Component Analysis (PCA)
- Ancestry Inference Software
  Ancestry Inference Software
  - Using Admixture
  - Using Rye
- Plotting
  Plotting
  - Plotting
Integrated Risk Prediction Tool for Colorectal Cancer
Integrated Risk Prediction Tool for Colorectal Cancer
- Developing an Integrated Risk Prediction Tool for Colorectal Cancer
- Cohort used for the study Cohort used for the study
  Table of contents
  - Obtaining the cohort for the study
  - Cohort distribution
- Clinical risk factors
  Clinical risk factors
- Polygenic risk scores
  Polygenic risk scores
- Integrated risk score
  Integrated risk score

Cohort used for the study

Obtaining the cohort for the study

Flowchart describing the case-control cohort obtained from the UK Biobank

Cohort distribution

Statistics	Full cohort (White)
Number	15917
Mean age	61.2 years
Standard deviation of age	6.4
Male	8623 (54.18%)
Female	7294 (45.82%)